PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma87g00390.1
Common NameZOSMA_87G00390
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 428aa    MW: 46835.3 Da    PI: 7.1308
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma87g00390.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.40.00063303611854
                      HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      +++  L++++ +      +K + a++L +A++YIk L
  Zosma87g00390.1 330 EKITALQQIVSPF-----GKTDTASVLMEAINYIKFL 361
                      5777888888887.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.074312361IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.4E-9327372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-8327371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.65E-4330366No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MARQVSQSSV ASTHTNSNLN WWDIHANPTS SWNSWQHQKL MDTNPPHSVT IDGGSDSFPN  60
VPNNSGAGDP TASLLWNHVL LNGGDVHKHQ GDENFNLLET LSSKNLAPDM FEPACDYLKK  120
LDESWELAAP PVPFPTTTTT ATNLTDLVSN WSIAPPQPGF DYHHLHGSAT TTSDLFGEHI  180
ELQNSSSPYS SCSYSGQNVD SVASENAGML SLTYGDDIHH IGDRYSAASD ASRSNTRNFT  240
DLINFGGLMR NTTTKQLVTV DQLNSPSTHT ITKQGKEIGE GNVKGKMKKN KKKRSDKSSD  300
GVLKKCKHET MASSNLSSAK IQIPKVKLGE KITALQQIVS PFGKTDTASV LMEAINYIKF  360
LHEQVQLLSQ DPFMKPGSAK NVEIKLGLGN RGLCLVPISS TLQIHRENDK LNGPDCWTPN  420
YRGFLYR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9NKJ80.0A0A0K9NKJ8_Z
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP716979
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.12e-29bHLH family protein